MEGABASE is a neural network that generates chromatin compartment and sub-compartment annotations from epigenetic information.

We are currently implementing an updated version of the MEGABASE code. Our goal is to facilitate the user experience when running the predictions.

Our new code is called pyMEGABASE, and it is available on GitHub (source code installation) and Google Colab Notebook (Recommended). This is still a beta code, but version 1.0 should be available on pip and conda soon.

Please do not hesitate to reach us if you have any questions or find any bugs. We appreciate it!

Esteban Dodero-Rojas -

Vinícius Contessoto -